Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943447.1_cds_XP_016486622.1_77446
CDS Infomation

[gene=LOC107806863] [db_xref=GeneID:107806863] [protein=U-box domain-containing protein 14-like] [protein_id=XP_016486622.1] [location=complement(join(18944..20014,20133..20546,20633..20749,21797..22069))] [gbkey=CDS]
Sequence

ATGGATCATGAGAAAGAGGCCTTAATCAATGAGCTGACGGAGTTAATCGACACCGTTTCG
GGTTTGCCGGAGTGCAAGAATGTGTCTAAGAGGATGTACAGTAATTTGGTGAGAAGGGTG
AAGCTATTGAGCCCTTTAGTTGAGGAAATGAAAGATAGTGATGTTGTTGAGGTTGGAGAT
GATGTGGTTCATGGGCTTGAGTTGTTGAGAATTGCTCTTAATTCAGCTTTGGAGCTTCTC
AAATCTGTCAATGAAGGCAGTAAGATTTTTCAGGCTCTGCAGATGGACACCATATCACTA
AGGTTTCTTAATGTAACAGAGAAAATTGAAGATGCACTAAGCCACATTCCTTACAACAAG
CTTGATATTTCTGAGGAAGTTCGAGAACAAATTGAACTTGTGCATGCTCAATTTAAAAGA
GCAAAAGGAAAGATGGAATCACCAGATGTGCAACTGGTAATCGATTTAGCTATGGCTGAA
AGGGAACAAGATCCCGATTCCATGATTTTTAAACGGCTGTCAGAGAAGCTGCATCTCAGG
ACCGTAAATGATCTAAAGAAGGAGTCACTTGCCATCCATGACATGGTCATTTCTAGTGGT
GGAGTTCCCGAAGAGTGCTTTGAAACGATTGCATTCCTCCTTAGAAAGCTAAAGGACTGC
GCAATGACGGGGAATCCTGAAATGGATGTCCTTGAGGGTGACAAGAGTATGATTAAGCAC
AGATCTCCGGTCATTCCAGATGATTTTCGTTGTCCAATATCACTTGAGTTGATGAAAGAT
CCTGTTATTGTGTCTACCGGACAGACCTATGAAAGGTCTTGCATCCAGAAATGGCTGGAT
GCAGGACACAAGACCTGCCCTAAGACTCAGCAGACATTGTTGCACACCGCATTGACTCCA
AACTATGTTTTGAAGAGCCTGATTGCCTTGTGGTGTGAGAACAATGGTGTTGAGCTGCCT
AAAAACCAAGGAAATTGTAGGAACAAAAGGTCTGGAGCTGGTGGTTCGGACTGTGATCGT
GCTGCTATTGATGCGTTGTTACAAAAACTTGCCAATGGTAATCCGGAACAGCAAAGAGCA
GCTGCTGGTGAGCTCCGTTTGCTGGCCAAAAGAAATGCTGATAACAGAGTCTGCATTGCT
GAAGCCGGAGCAATTCCTCTGCTTGTTGAACTGCTTTCATCGTCAGATTCTCGTACTCAG
GAGCACGCTGTCACGGCACTCCTTAACCTATCCATAAATGAATCTAACAAGGGAACTATT
GTAAATGCTGGTGCTATACCTGATATAGTAGATGTACTAAGAAACGGAAGCATGGAAGCA
AGGGAAAATGCAGCCGCTACCCTTTTTAGCTTATCAGTGGTTGACGAAAACAAAGTGGCA
ATAGGAGCCGCCGGTGCTATCCCAGCGCTTATTGATTTGCTTTGTCAGGGAACTCCCAGG
GGAAAGAAGGATGCAGCCACTGCTATATTCAACCTCTCAATCTATCAAGGAAACAAGGTG
AGGGCAGTACGGGCAGGGATTGTGCCACCGCTAATGAGATTGCTCAAAGATCCCGGGGGT
GGAATGATGGATGAAGCACTCGCAATATTGGCAATACTTGCAAGTCATCAGGAGGGTAAG
GCAGCCATTGGTCAAGCTGAGCCAATCCCCATCTTAGTTGAGGTAATTAGGACAGGTTCT
CCTCGGAACCGAGAAAATGCTGCAGCTATTTTGTGGTCTCTATGTACAGGTGATGTACAG
AACTTAAAGGTAGCTAGGGATCTTGGAGTAGAAGAGGTACTGAAGGAACTGTCCGAGAAT
GGCACTGATAGAGCCAAAAGAAAAGCCGGAAGTGTTTTGGAACTTCTCCAACGAGTTGAT
GCAGTTGATTCATGA

Peptide Sequence

PEP ID

XP_016486622.1
PEP Infomation

PREDICTED: U-box domain-containing protein 14-like [Nicotiana tabacum]
Sequence

MDHEKEALINELTELIDTVSGLPECKNVSKRMYSNLVRRVKLLSPLVEEMKDSDVVEVGD
DVVHGLELLRIALNSALELLKSVNEGSKIFQALQMDTISLRFLNVTEKIEDALSHIPYNK
LDISEEVREQIELVHAQFKRAKGKMESPDVQLVIDLAMAEREQDPDSMIFKRLSEKLHLR
TVNDLKKESLAIHDMVISSGGVPEECFETIAFLLRKLKDCAMTGNPEMDVLEGDKSMIKH
RSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTP
NYVLKSLIALWCENNGVELPKNQGNCRNKRSGAGGSDCDRAAIDALLQKLANGNPEQQRA
AAGELRLLAKRNADNRVCIAEAGAIPLLVELLSSSDSRTQEHAVTALLNLSINESNKGTI
VNAGAIPDIVDVLRNGSMEARENAAATLFSLSVVDENKVAIGAAGAIPALIDLLCQGTPR
GKKDAATAIFNLSIYQGNKVRAVRAGIVPPLMRLLKDPGGGMMDEALAILAILASHQEGK
AAIGQAEPIPILVEVIRTGSPRNRENAAAILWSLCTGDVQNLKVARDLGVEEVLKELSEN
GTDRAKRKAGSVLELLQRVDAVDS

Transcript Sequence

Gene sequence data has not been registered.